CDS

Accession Number TCMCG041C19825
gbkey CDS
Protein Id XP_019054365.1
Location complement(join(2651552..2651644,2652408..2652476,2652557..2652623,2654009..2654076,2654241..2654351,2655390..2655447,2655600..2655636,2663653..2663746,2665400..2665465,2665549..2665613,2665730..2665874,2666036..2666101,2666566..2666715,2669923..2669992,2674451..2674527,2674646..2674714,2674818..2674901,2675095..2675138,2675282..2675425,2675508..2675706,2677223..2677351,2677466..2677549,2677712..2677825,2678577..2678684,2678766..2678861,2681695..2681763,2683531..2683632,2685217..2685312,2685715..2685798,2687078..2687195,2687365..2687441,2689121..2689312,2689526..2689773,2692505..2692655,2692801..2692917,2693558..2693665,2693981..2694080,2694391..2694464,2695029..2695073))
Gene LOC104603760
GeneID 104603760
Organism Nelumbo nucifera

Protein

Length 1295aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA264089
db_source XM_019198820.1
Definition PREDICTED: Niemann-Pick C1 protein-like isoform X1 [Nelumbo nucifera]

EGGNOG-MAPPER Annotation

COG_category I
Description Niemann-Pick C1
KEGG_TC 2.A.6.6
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko02000        [VIEW IN KEGG]
KEGG_ko ko:K12385        [VIEW IN KEGG]
EC -
KEGG_Pathway ko04142        [VIEW IN KEGG]
ko04979        [VIEW IN KEGG]
map04142        [VIEW IN KEGG]
map04979        [VIEW IN KEGG]
GOs GO:0000323        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005496        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005576        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005635        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005764        [VIEW IN EMBL-EBI]
GO:0005773        [VIEW IN EMBL-EBI]
GO:0005783        [VIEW IN EMBL-EBI]
GO:0005886        [VIEW IN EMBL-EBI]
GO:0005887        [VIEW IN EMBL-EBI]
GO:0006082        [VIEW IN EMBL-EBI]
GO:0006464        [VIEW IN EMBL-EBI]
GO:0006486        [VIEW IN EMBL-EBI]
GO:0006629        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006810        [VIEW IN EMBL-EBI]
GO:0006869        [VIEW IN EMBL-EBI]
GO:0007034        [VIEW IN EMBL-EBI]
GO:0007041        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008202        [VIEW IN EMBL-EBI]
GO:0008206        [VIEW IN EMBL-EBI]
GO:0008289        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009059        [VIEW IN EMBL-EBI]
GO:0009100        [VIEW IN EMBL-EBI]
GO:0009101        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010876        [VIEW IN EMBL-EBI]
GO:0012505        [VIEW IN EMBL-EBI]
GO:0015485        [VIEW IN EMBL-EBI]
GO:0015850        [VIEW IN EMBL-EBI]
GO:0015918        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016021        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0019752        [VIEW IN EMBL-EBI]
GO:0030301        [VIEW IN EMBL-EBI]
GO:0031224        [VIEW IN EMBL-EBI]
GO:0031226        [VIEW IN EMBL-EBI]
GO:0031967        [VIEW IN EMBL-EBI]
GO:0031975        [VIEW IN EMBL-EBI]
GO:0032787        [VIEW IN EMBL-EBI]
GO:0032934        [VIEW IN EMBL-EBI]
GO:0033036        [VIEW IN EMBL-EBI]
GO:0034645        [VIEW IN EMBL-EBI]
GO:0036094        [VIEW IN EMBL-EBI]
GO:0036211        [VIEW IN EMBL-EBI]
GO:0042592        [VIEW IN EMBL-EBI]
GO:0042632        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043178        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0043413        [VIEW IN EMBL-EBI]
GO:0043436        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044281        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044425        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044459        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0048471        [VIEW IN EMBL-EBI]
GO:0048878        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051234        [VIEW IN EMBL-EBI]
GO:0055088        [VIEW IN EMBL-EBI]
GO:0055092        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0065008        [VIEW IN EMBL-EBI]
GO:0070085        [VIEW IN EMBL-EBI]
GO:0071702        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071944        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:1901135        [VIEW IN EMBL-EBI]
GO:1901137        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1901566        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]
GO:1901615        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGAGATTTGTCTATGGTTACTGGTGGCTTTGTCTCTGTTGCAGAGCACAATTGTATCTTTAGCAAGTGCAGATACTTATGACCCACGGTTTTTTTTGGTGTCTAATATCAGTTTAAGGGAAAGACACTCAGAAGAGTATTGTGCAATGTATGATATTTGTGGAGAACGTAGTGATGGGAAGGTCTTGAACTGTCCTTATGGTTCCCCATCGGTGAAGCCAGATGAGCTGCTTTCTTCAAAGATCCAAAGCTTGTGTCCAACAATCACTGGTAATGTTTGTTGTACAGAAGTTCAGTTTGACACATTGCGGGCCCAAGTCCAACAAGCGATTCCTTTTCTTGTAGGTTGCCCAGCATGCTTGAGGAACTTCTTAAACCTTTTCTGTGAACTTTCCTGCTCACCTAACCAGAGTTTATTCATCAATGTGACATCTGTTTCCAAGGTTAATGACAGTTTGACCGTGGATGGCATTGATTTTTATGTAACTGATGCTTTTGGTGAAGAGATGTATAACTCTTGCAAGGATGTAAAATTTGGGACAATGAATAGTCGAGCCATGGACTTCATTGGTGCAGGTGCTCAAAATTTTAAAGAATGGTTTGAATTTATTGGTCGTCAAGCAGATCTTGATGTCCCTGGTTCACCATATGCCATTAATTTCCGGTCAAGTATCTCTGATTCCTCTGGGATGAAACCTATGAATGTATCTGTCTATTCATGCGGTGACACTTTGCTTGGTTGTTCTTGTGGTGATTGCCCTTCTTCTCCCACATGCTCCAGTTCACCACCCCCTCCTCCTCCCAAAAGATATACCTGTTCAATTAGTATCTGGCCTTTAAAGGTTAGATGTATCGAATTTGCAATGTCTATCCTATATATTATTTTGGTTTCTGCTTTCCTTGGATGGAGCTTGTTTCATAGGACAAGAGGAAGAAGGAGACTTGCTTCCAGATTGAAACCTTTGTTGAATGTCATGGATGAAAGTGAACTCCATTTTCTTAACAAGCAGAAAGATGAGAACCTTACTTTACAGATGCATGAAGAGGTTCCTCAAACGGTAAATGGTGATCAACTTTCTATTGTGCAAGGATACATATCGAGTTGGTATAGGAGATATGGATCATGGGTTGCTAGAAACCCAACTCTTGTTTTATGTTCATCGTTGGTTGTTGTTCTTCTACTCTGCCTAGGTTTAATCCATTTCAAGGTGGAGACACGACCTGAGAAGCTATGGGTTGGTCCTGGAAGTAGAGCTGCAGAAGAGAAGTACTTTTTTGACAGCCACCTAGCCCCCTTTTATAGAATTGAACAGCTTATATTAGCAACTATTCCTGATCCAAAGAATGGGAAGTCACCAAGTATTGTGACAGAAGATAACATTCAGCTACTCTTTGAAATACAAAAGAAGGTTGATGGAATTCGTGCAAATTATTCTGGATCAATTGTAGCCCTATCTGACATATGCTTGAAGCCACTCGATCAGGAGTGTGCTACTCAAAGTGTCCTGCAGTATTTCAAAATGGACCCTGAAAAATATGATGATTATGGGGGAGTTGATCACGTTGAGTATTGCCTTCAGCATTACACCTCTGCGGGTACATGCATGAGTGCATTTAAGGCTCCTCTTGATCCAAGCACAGCATTGGGGGGATTTTCCGGGAACAATTATTCAGAGGCTTCTGCATTTATAGTAACTTATCCAGTAAATAATATGGTTGAGAAAAAAGGCACTGATGCTGGAAAAGCAGTGGCTTGGGAAAAAGCTTTTGTTCAGTTGGCAAAGGAAGAGCTGATGCCGATGGTGCAATCTAAGAATCTCACACTTTCCTTTTCATCGGAAAGCTCTATTGAGGAAGAACTGAAAAGAGAAAGTACTGCAGATGTTATAACCATTTTGATAAGCTATGTTGTGATGTTTGCTTATATATCTATGACTTTGGGAGGTCCACCTCAATTTTCATCTTTCTACATTTCATCCAAGGTGCTACTTGGCTTTTCAGGAGTTATTGTTGTCATGCTTTCTGTTCTTGGATCTGTAGGATTTTTCAGTGCTATTGGAGTAAAGTCTACACTAATAATAATGGAAGTTATTCCTTTTCTCGTTTTGGCTGTTGGAGTGGATAACATGTGTATCTTGGTACATGCTGTCAAACGGCAACCACTGGAGTTGCCTTTAGAAGGGAGAATAAGTAATGCTCTGGTTGAAGTTGGGCCATCTATAACATTAGCTAGTTTATCTGAGGTTTTGGCATTTGCAGTTGGAGGTTTCATTTCAATGCCAGCATGCCGTGTATTCTCCATGTTTGCAGCCTTGGCTGTTCTTCTGGACTTCCTTTTGCAAGTTACTGCTTTTGTTGCCTTGATAGTTTTTGACTCTTTGCGGGCTGAAGATCATAGGGTTGACTGTTTTCCATGCATAAAAGTTCTCCAATCCTCTGCTGAACCTGATGGTGGGATTGGTCGGAGAAAGCCTGGATTGCTGACTCGATATATGAAGGAAGTCCATGCACCGATTCTTTCTCTTTGGGGAGTTAAAATGGTTGTCATCGCAATCTTCGTTGCTTTAACTTTAGCAAGCATTGCATTATGCTTGAGAATACAACCTGGTTTAGAACAACAGATTGTTCTTCCCCGAGATTCATATCTTCAGGGATACTTCAGTAATGTCTCTGAGCATCTTAGAGTAGGTCCGCCATTATATTTTGTGGTGAAGAACTATAATTACAGCTCAGAATCAAGACATACAAACCAATTATGCTCTATCAGCCAATGTGATGCAAACTCTCTTTCAAATGAGATAGCAAGAGCATCCTCGGTTCCAGAGTCAAGCTACATTGCTAAGCCAGCTGCTTCGTGGCTTGATGACTTTCTTGTTTGGATATCTCCAGAAGCATTTGGTTGTTGTCGGAAGTTCACAAATGGGAGTTACTGCCCCCCTGATGATCAGCCTCCATGTTGCTCACCTGATGAAGGTTATTGTGGCATAGGTGGGGTATGCAAAGATTGTACCACGTGCTTCCGTCACTCAGATTTGCATAATGGTCGACCTTCTACAGCACAATTTAGGGAGAAACTTCCATGGTTCCTTGATGCCCTACCATCTGCTGATTGTGCCAAGGGTGGGCATGGTGCTTACACTAACAGTGTGGATCTGAATGGTTACGAAAATGGTGTCATACAAGCTTCAGAGTTTCGTACATATCACACACCACTCAATAAACAAAGTGACTATGTTAATTCATTGCGAGCCGCACGAGAGTTCAGCTCGAGGGTTTCAGATTCTTTGGGGATTGAAATTTTTCCATATTCCGTCTTTTACATGTTTTTTGAGCAATACCTGGATATTTGGAGGACAGCATTGATCAACCTTGCAATTGCTCTCGGTGCTGTGTTTATTGTATGCCTGGTAATCACTTGCAGTATATGGAGTTCCGCAATTATCTTAATTGTCTTGGCAATGATTGTTCTAGATCTCATGGGTGTGATGGCAATTCTAGAAATTCAACTGAATGCAGTCTCTGTTGTAAACCTAGTAATGTCAATAGGGATAGCTGTTGAGTTTTGCGTGCATATTACACATGCTTTCTCGGTAACCGATGGAGACAGAGGCCAACGAGCAAAGGAGGCTCTTAGTACCATGGGAGCTTCTGTCTTCAGTGGAATTACACTTACCAAGCTAGTTGGAGTGATCGTCCTATGCTTTGCAAGATCAGAAGTTTTTGTGGTTTATTACTTCCAAATGTACCTAGCACTGGTACTTATTGGGTTCTTGCACGGGCTTGTATTTTTACCCGTGGTATTAAGCATTTGTGGACCCCCGTCAAGAAGATGTCTACTGATTGAGAAGAAAGAAGAGGATCAAGTGTCAACTTCATCACAGCTCTAG
Protein:  
MEICLWLLVALSLLQSTIVSLASADTYDPRFFLVSNISLRERHSEEYCAMYDICGERSDGKVLNCPYGSPSVKPDELLSSKIQSLCPTITGNVCCTEVQFDTLRAQVQQAIPFLVGCPACLRNFLNLFCELSCSPNQSLFINVTSVSKVNDSLTVDGIDFYVTDAFGEEMYNSCKDVKFGTMNSRAMDFIGAGAQNFKEWFEFIGRQADLDVPGSPYAINFRSSISDSSGMKPMNVSVYSCGDTLLGCSCGDCPSSPTCSSSPPPPPPKRYTCSISIWPLKVRCIEFAMSILYIILVSAFLGWSLFHRTRGRRRLASRLKPLLNVMDESELHFLNKQKDENLTLQMHEEVPQTVNGDQLSIVQGYISSWYRRYGSWVARNPTLVLCSSLVVVLLLCLGLIHFKVETRPEKLWVGPGSRAAEEKYFFDSHLAPFYRIEQLILATIPDPKNGKSPSIVTEDNIQLLFEIQKKVDGIRANYSGSIVALSDICLKPLDQECATQSVLQYFKMDPEKYDDYGGVDHVEYCLQHYTSAGTCMSAFKAPLDPSTALGGFSGNNYSEASAFIVTYPVNNMVEKKGTDAGKAVAWEKAFVQLAKEELMPMVQSKNLTLSFSSESSIEEELKRESTADVITILISYVVMFAYISMTLGGPPQFSSFYISSKVLLGFSGVIVVMLSVLGSVGFFSAIGVKSTLIIMEVIPFLVLAVGVDNMCILVHAVKRQPLELPLEGRISNALVEVGPSITLASLSEVLAFAVGGFISMPACRVFSMFAALAVLLDFLLQVTAFVALIVFDSLRAEDHRVDCFPCIKVLQSSAEPDGGIGRRKPGLLTRYMKEVHAPILSLWGVKMVVIAIFVALTLASIALCLRIQPGLEQQIVLPRDSYLQGYFSNVSEHLRVGPPLYFVVKNYNYSSESRHTNQLCSISQCDANSLSNEIARASSVPESSYIAKPAASWLDDFLVWISPEAFGCCRKFTNGSYCPPDDQPPCCSPDEGYCGIGGVCKDCTTCFRHSDLHNGRPSTAQFREKLPWFLDALPSADCAKGGHGAYTNSVDLNGYENGVIQASEFRTYHTPLNKQSDYVNSLRAAREFSSRVSDSLGIEIFPYSVFYMFFEQYLDIWRTALINLAIALGAVFIVCLVITCSIWSSAIILIVLAMIVLDLMGVMAILEIQLNAVSVVNLVMSIGIAVEFCVHITHAFSVTDGDRGQRAKEALSTMGASVFSGITLTKLVGVIVLCFARSEVFVVYYFQMYLALVLIGFLHGLVFLPVVLSICGPPSRRCLLIEKKEEDQVSTSSQL